STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI14655.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
SFI01638.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
 0.790
SFI14631.1
Protein of unknown function.
       0.657
SFI14600.1
Conserverd hypothetical protein.
       0.647
SFI14680.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
       0.496
SFI14576.1
Conserverd hypothetical protein.
       0.444
SFH75997.1
Glycerophosphoryl diester phosphodiesterase.
    
  0.421
SFI96226.1
Glycerophosphoryl diester phosphodiesterase.
    
  0.421
SFI09837.1
Hypothetical protein.
    
 0.409
SFI09865.1
Hypothetical protein.
    
 0.409
Your Current Organism:
Pseudomonas guineae
NCBI taxonomy Id: 425504
Other names: CECT 7231, LMG 24016, LMG:24016, P. guineae, Pseudomonas guineae Bozal et al. 2007, strain M8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.