STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI32740.1Nuclease-related domain-containing protein. (1684 aa)    
Predicted Functional Partners:
SFI32967.1
Hypothetical protein.
 
    0.919
SFI32944.1
Hypothetical protein.
 
  
 0.914
SFI33056.1
ATP-dependent Lon protease.
 
    0.903
SFI33031.1
PglZ domain-containing protein.
  
    0.885
SFJ22482.1
Protein of unknown function.
 
    0.868
SFI06455.1
PAS domain S-box-containing protein.
  
 0.833
SFI32718.1
Hypothetical protein.
       0.819
SFI64094.1
Na+/proline symporter.
   
 0.800
SFI16251.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.785
SFI38401.1
Multi-sensor hybrid histidine kinase.
   
 0.784
Your Current Organism:
Pseudomonas guineae
NCBI taxonomy Id: 425504
Other names: CECT 7231, LMG 24016, LMG:24016, P. guineae, Pseudomonas guineae Bozal et al. 2007, strain M8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.