STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI71444.1Ca-activated chloride channel family protein. (343 aa)    
Predicted Functional Partners:
SFI12231.1
Protoporphyrin IX magnesium-chelatase.
  
 0.987
SFI71326.1
MoxR-like ATPase.
 
 
 0.966
SFI71363.1
Protein of unknown function DUF58.
 
  
 0.961
SFI71507.1
Oxygen tolerance.
 
   
 0.959
SFI71471.1
Ca-activated chloride channel family protein.
   
 0.957
SFI71397.1
Protein of unknown function.
 
     0.899
SFI12206.1
Cobaltochelatase CobN subunit.
  
 0.838
SFH90778.1
MoxR-like ATPase.
 
 
 0.778
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.707
SFJ05674.1
Glutathione-independent formaldehyde dehydrogenase.
   
 
 0.701
Your Current Organism:
Pseudomonas guineae
NCBI taxonomy Id: 425504
Other names: CECT 7231, LMG 24016, LMG:24016, P. guineae, Pseudomonas guineae Bozal et al. 2007, strain M8
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