Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI06455.1 | SFI84338.1 | SAMN05216206_1300 | SAMN05216206_2962 | PAS domain S-box-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.775 |
SFI06455.1 | SFI84371.1 | SAMN05216206_1300 | SAMN05216206_2963 | PAS domain S-box-containing protein. | Nucleotide-binding universal stress protein, UspA family. | 0.440 |
SFI32058.1 | SFI84371.1 | SAMN05216206_1867 | SAMN05216206_2963 | Sigma 54 modulation protein / S30EA ribosomal protein. | Nucleotide-binding universal stress protein, UspA family. | 0.437 |
SFI63740.1 | SFI84371.1 | SAMN05216206_2611 | SAMN05216206_2963 | methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | Nucleotide-binding universal stress protein, UspA family. | 0.404 |
SFI84338.1 | SFI06455.1 | SAMN05216206_2962 | SAMN05216206_1300 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.775 |
SFI84338.1 | SFI84371.1 | SAMN05216206_2962 | SAMN05216206_2963 | Diguanylate cyclase (GGDEF) domain-containing protein. | Nucleotide-binding universal stress protein, UspA family. | 0.486 |
SFI84338.1 | SFI84405.1 | SAMN05216206_2962 | SAMN05216206_2964 | Diguanylate cyclase (GGDEF) domain-containing protein. | Sulfate permease, SulP family. | 0.476 |
SFI84371.1 | SFI06455.1 | SAMN05216206_2963 | SAMN05216206_1300 | Nucleotide-binding universal stress protein, UspA family. | PAS domain S-box-containing protein. | 0.440 |
SFI84371.1 | SFI32058.1 | SAMN05216206_2963 | SAMN05216206_1867 | Nucleotide-binding universal stress protein, UspA family. | Sigma 54 modulation protein / S30EA ribosomal protein. | 0.437 |
SFI84371.1 | SFI63740.1 | SAMN05216206_2963 | SAMN05216206_2611 | Nucleotide-binding universal stress protein, UspA family. | methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.404 |
SFI84371.1 | SFI84338.1 | SAMN05216206_2963 | SAMN05216206_2962 | Nucleotide-binding universal stress protein, UspA family. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.486 |
SFI84371.1 | SFI84405.1 | SAMN05216206_2963 | SAMN05216206_2964 | Nucleotide-binding universal stress protein, UspA family. | Sulfate permease, SulP family. | 0.961 |
SFI84371.1 | SFJ17921.1 | SAMN05216206_2963 | SAMN05216206_3615 | Nucleotide-binding universal stress protein, UspA family. | Sigma 54 modulation protein / S30EA ribosomal protein. | 0.434 |
SFI84405.1 | SFI84338.1 | SAMN05216206_2964 | SAMN05216206_2962 | Sulfate permease, SulP family. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.476 |
SFI84405.1 | SFI84371.1 | SAMN05216206_2964 | SAMN05216206_2963 | Sulfate permease, SulP family. | Nucleotide-binding universal stress protein, UspA family. | 0.961 |
SFJ17921.1 | SFI84371.1 | SAMN05216206_3615 | SAMN05216206_2963 | Sigma 54 modulation protein / S30EA ribosomal protein. | Nucleotide-binding universal stress protein, UspA family. | 0.434 |