STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI84371.1Nucleotide-binding universal stress protein, UspA family. (283 aa)    
Predicted Functional Partners:
SFI84405.1
Sulfate permease, SulP family.
    0.961
SFI84338.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.486
SFI06455.1
PAS domain S-box-containing protein.
  
  
 0.440
SFI32058.1
Sigma 54 modulation protein / S30EA ribosomal protein.
  
  
 0.437
SFJ17921.1
Sigma 54 modulation protein / S30EA ribosomal protein.
  
  
 0.434
SFI63740.1
methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
  
    0.404
Your Current Organism:
Pseudomonas guineae
NCBI taxonomy Id: 425504
Other names: CECT 7231, LMG 24016, LMG:24016, P. guineae, Pseudomonas guineae Bozal et al. 2007, strain M8
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