STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI96433.1Transcriptional regulator, TetR family. (214 aa)    
Predicted Functional Partners:
SFI96521.1
linoleoyl-CoA desaturase.
 
  
 0.852
SFI96480.1
Ferredoxin-NADP reductase.
 
  
 0.690
SFI72567.1
General secretion pathway protein C.
  
     0.660
SFI96633.1
Hemoglobin/transferrin/lactoferrin receptor protein.
 
      0.628
plsB
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
  
   
 0.620
SFJ18892.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
 
 
 0.569
SFI12309.1
Uncharacterized conserved protein YegJ, DUF2314 family.
  
     0.546
ureF
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
       0.532
ureE
Urease accessory protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
       0.532
SFJ09791.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
 
   0.528
Your Current Organism:
Pseudomonas guineae
NCBI taxonomy Id: 425504
Other names: CECT 7231, LMG 24016, LMG:24016, P. guineae, Pseudomonas guineae Bozal et al. 2007, strain M8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.