STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ16430.1Arc-like DNA binding domain-containing protein. (105 aa)    
Predicted Functional Partners:
SFI70434.1
Protein of unknown function.
   
 
 0.954
SFI14631.1
Protein of unknown function.
  
     0.767
SFH76325.1
Peptidoglycan-binding protein, CsiV.
  
     0.765
SFI67517.1
Hypothetical protein.
  
     0.754
SFH76531.1
Hypothetical protein.
  
     0.753
SFH99725.1
Uncharacterized membrane protein affecting hemolysin expression.
  
     0.752
SFI44384.1
Hypothetical protein.
  
     0.752
SFI67216.1
Hypothetical protein.
  
     0.745
SFJ27439.1
Predicted secreted protein.
  
     0.745
SFI55670.1
CHAD domain-containing protein.
  
     0.734
Your Current Organism:
Pseudomonas guineae
NCBI taxonomy Id: 425504
Other names: CECT 7231, LMG 24016, LMG:24016, P. guineae, Pseudomonas guineae Bozal et al. 2007, strain M8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.