STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ92688.1Zinc transporter ZupT. (240 aa)    
Predicted Functional Partners:
SDZ92657.1
Undecaprenyl-diphosphatase.
  
   0.874
SDZ92618.1
Methyltransferase domain-containing protein.
       0.864
SEB12508.1
Cell division protein ZapA.
  
     0.695
SEA22097.1
Hypothetical protein.
  
     0.693
SDZ87151.1
Hypothetical protein.
  
     0.680
SEA21724.1
Arginase family enzyme; Belongs to the arginase family.
  
     0.638
SEA14487.1
Hypothetical protein.
  
     0.608
SDZ92587.1
Phosphomannomutase.
  
    0.600
SEA23692.1
Protein of unknown function.
  
     0.591
SDZ92556.1
Cysteine desulfurase.
  
    0.569
Your Current Organism:
Pedobacter hartonius
NCBI taxonomy Id: 425514
Other names: CIP 109468, DSM 19033, P. hartonius, Pedobacter hartonius Muurholm et al. 2007, WB 3.3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.