STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ99587.1Lipoprotein-releasing system permease protein. (406 aa)    
Predicted Functional Partners:
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
  0.962
SEB21269.1
Lipoprotein-releasing system permease protein.
  
  
 
0.918
SEB08418.1
Outer membrane lipoprotein-sorting protein.
 
 
 
 0.831
SEB08821.1
Putative ABC transport system ATP-binding protein.
   
  0.802
SDZ99622.1
Uncharacterized conserved protein YbbC, DUF1343 family.
       0.737
SEA42169.1
Putative ABC transport system ATP-binding protein.
   
  0.731
SEA67365.1
Putative ABC transport system ATP-binding protein.
   
  0.730
SEB00382.1
Putative ABC transport system ATP-binding protein.
   
  0.730
SEB08738.1
ABC-type lipoprotein export system, ATPase component.
   
  0.730
SDZ99656.1
Hypothetical protein.
       0.721
Your Current Organism:
Pedobacter hartonius
NCBI taxonomy Id: 425514
Other names: CIP 109468, DSM 19033, P. hartonius, Pedobacter hartonius Muurholm et al. 2007, WB 3.3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.