STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA21381.1Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily. (420 aa)    
Predicted Functional Partners:
SEB04797.1
alpha-N-acetylglucosaminidase.
  
 
  0.557
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
       0.531
SEA21343.1
Lysophospholipase L1.
       0.531
SEA21237.1
Glutamine cyclotransferase.
       0.514
SEA21275.1
Putative endonuclease; Belongs to the UPF0102 family.
       0.514
SEB15329.1
Hypothetical protein.
  
  
  0.502
nadK
NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
   
 
  0.499
SEA78246.1
Zn-dependent amino-or carboxypeptidase, M28 family.
  
  
  0.421
SEA96378.1
Alpha-glucosidase, glycosyl hydrolase family GH31; Belongs to the glycosyl hydrolase 31 family.
    
  0.402
SEB16354.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
    
  0.402
Your Current Organism:
Pedobacter hartonius
NCBI taxonomy Id: 425514
Other names: CIP 109468, DSM 19033, P. hartonius, Pedobacter hartonius Muurholm et al. 2007, WB 3.3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.