STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA36381.1Conserved hypothetical integral membrane protein. (424 aa)    
Predicted Functional Partners:
SEA36449.1
Hypothetical protein.
 
     0.902
SEA36490.1
Hypothetical protein.
 
     0.868
SEA36334.1
Cytochrome c.
       0.803
SEA36415.1
Phytoene dehydrogenase-related protein.
       0.803
SEA36530.1
Cyanophycinase; Belongs to the peptidase S51 family.
       0.714
SEA36289.1
Sulfane dehydrogenase subunit SoxC.
       0.636
SEA44645.1
RagB/SusD domain-containing protein.
 
     0.462
Your Current Organism:
Pedobacter hartonius
NCBI taxonomy Id: 425514
Other names: CIP 109468, DSM 19033, P. hartonius, Pedobacter hartonius Muurholm et al. 2007, WB 3.3-3
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.