STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA48347.1Beta-galactosidase. (600 aa)    
Predicted Functional Partners:
SEB04797.1
alpha-N-acetylglucosaminidase.
 
 
 0.744
SEA27901.1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
 
  0.718
SEB10192.1
Alpha-galactosidase.
 
  
 0.714
SEA98408.1
Hypothetical protein.
   
 0.699
SDZ86172.1
Glycosyl hydrolases family 2, TIM barrel domain.
  
 
  0.677
SEA73518.1
Beta-galactosidase.
  
 
  0.648
SEA73544.1
Beta-galactosidase.
  
 
  0.635
SEA18055.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
  0.627
SEB19532.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
  0.626
SEB12008.1
Carboxypeptidase C (cathepsin A).
    
  0.612
Your Current Organism:
Pedobacter hartonius
NCBI taxonomy Id: 425514
Other names: CIP 109468, DSM 19033, P. hartonius, Pedobacter hartonius Muurholm et al. 2007, WB 3.3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.