STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA69085.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
SEA69111.1
Activator of Hsp90 ATPase homolog 1-like protein.
 
     0.814
SEA69143.1
glutaryl-CoA dehydrogenase.
       0.724
SDZ94194.1
Protein of unknown function, DUF481.
  
     0.642
SEA69172.1
Dihydroneopterin aldolase.
       0.523
SEA42320.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.479
SDZ83183.1
C-terminal domain of CHU protein family protein.
  
     0.465
SEA69197.1
Glycolate oxidase.
       0.439
SEA50555.1
Hypothetical protein.
  
     0.438
SEA41799.1
Hypothetical protein.
  
     0.433
SEA21951.1
Hypothetical protein.
  
     0.425
Your Current Organism:
Pedobacter hartonius
NCBI taxonomy Id: 425514
Other names: CIP 109468, DSM 19033, P. hartonius, Pedobacter hartonius Muurholm et al. 2007, WB 3.3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.