STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA92269.1Type II restriction/modification system, DNA methylase subunit YeeA. (1271 aa)    
Predicted Functional Partners:
SEA92294.1
Superfamily II DNA or RNA helicase, SNF2 family.
 
     0.950
SEA92325.1
ATP-dependent helicase YprA, contains C-terminal metal-binding DUF1998 domain.
 
     0.948
SEB09243.1
Hypothetical protein.
  
     0.625
SEA43547.1
Putative endonuclease.
  
  
 0.444
SEA92349.1
Superfamily I DNA and/or RNA helicase.
  
    0.440
SEA25526.1
Glycosyltransferase sugar-binding region containing DXD motif-containing protein.
  
     0.434
Your Current Organism:
Pedobacter hartonius
NCBI taxonomy Id: 425514
Other names: CIP 109468, DSM 19033, P. hartonius, Pedobacter hartonius Muurholm et al. 2007, WB 3.3-3
Server load: low (22%) [HD]