STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB00420.1RES domain-containing protein. (151 aa)    
Predicted Functional Partners:
SEB00435.1
Putative toxin-antitoxin system antitoxin component, TIGR02293 family.
 
 
 0.990
SEA37129.1
Putative toxin-antitoxin system antitoxin component, TIGR02293 family.
 
 
 0.954
SEB15357.1
Hypothetical protein.
  
 
 0.809
SEB00451.1
Cyclic pyranopterin monophosphate synthase subunit MoaC.
       0.505
SEB00472.1
Molybdopterin synthase catalytic subunit.
       0.505
SEB00490.1
Adenylyltransferase and sulfurtransferase.
       0.505
SEB00511.1
Molybdopterin synthase sulfur carrier subunit.
       0.505
SEB19328.1
TIGR01666 family membrane protein.
  
     0.416
SEB00531.1
Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
       0.411
Your Current Organism:
Pedobacter hartonius
NCBI taxonomy Id: 425514
Other names: CIP 109468, DSM 19033, P. hartonius, Pedobacter hartonius Muurholm et al. 2007, WB 3.3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.