STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB06382.1Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (1176 aa)    
Predicted Functional Partners:
SEB06342.1
Assimilatory nitrite reductase (NAD(P)H) small subunit.
 0.998
SEB06404.1
Rubredoxin.
 
 0.998
SEB06370.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
 
 0.996
SEA20879.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
  
 
 0.995
SEB01958.1
NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
  
 0.995
SEB01979.1
NADH dehydrogenase subunit E.
  
 0.991
SEB20290.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
  
 0.979
SEB01940.1
NADH dehydrogenase subunit G.
   
 0.978
SEB19556.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.978
SEB06328.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
0.954
Your Current Organism:
Pedobacter hartonius
NCBI taxonomy Id: 425514
Other names: CIP 109468, DSM 19033, P. hartonius, Pedobacter hartonius Muurholm et al. 2007, WB 3.3-3
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