Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ91090.1 | SEA01697.1 | SAMN05443550_101408 | SAMN05443550_101696 | Hypothetical protein. | TonB dependent receptor. | 0.735 |
SDZ91090.1 | SEA12825.1 | SAMN05443550_101408 | SAMN05443550_10268 | Hypothetical protein. | Putative porin. | 0.756 |
SDZ91090.1 | SEA19751.1 | SAMN05443550_101408 | SAMN05443550_102267 | Hypothetical protein. | Protein of unknown function. | 0.745 |
SDZ91090.1 | SEA93420.1 | SAMN05443550_101408 | SAMN05443550_10758 | Hypothetical protein. | Transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | 0.451 |
SDZ91090.1 | SEB01050.1 | SAMN05443550_101408 | SAMN05443550_108152 | Hypothetical protein. | Hypothetical protein. | 0.735 |
SDZ91090.1 | SEB12362.1 | SAMN05443550_101408 | SAMN05443550_11159 | Hypothetical protein. | Hypothetical protein. | 0.690 |
SDZ91090.1 | SEB21314.1 | SAMN05443550_101408 | SAMN05443550_11916 | Hypothetical protein. | Hypothetical protein. | 0.408 |
SEA01697.1 | SDZ91090.1 | SAMN05443550_101696 | SAMN05443550_101408 | TonB dependent receptor. | Hypothetical protein. | 0.735 |
SEA01697.1 | SEA12825.1 | SAMN05443550_101696 | SAMN05443550_10268 | TonB dependent receptor. | Putative porin. | 0.745 |
SEA01697.1 | SEA17290.1 | SAMN05443550_101696 | SAMN05443550_102193 | TonB dependent receptor. | Hypothetical protein. | 0.559 |
SEA01697.1 | SEA19751.1 | SAMN05443550_101696 | SAMN05443550_102267 | TonB dependent receptor. | Protein of unknown function. | 0.680 |
SEA01697.1 | SEA26422.1 | SAMN05443550_101696 | SAMN05443550_102470 | TonB dependent receptor. | Hypothetical protein. | 0.557 |
SEA01697.1 | SEA93420.1 | SAMN05443550_101696 | SAMN05443550_10758 | TonB dependent receptor. | Transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | 0.459 |
SEA01697.1 | SEB01050.1 | SAMN05443550_101696 | SAMN05443550_108152 | TonB dependent receptor. | Hypothetical protein. | 0.723 |
SEA01697.1 | SEB12362.1 | SAMN05443550_101696 | SAMN05443550_11159 | TonB dependent receptor. | Hypothetical protein. | 0.709 |
SEA12825.1 | SDZ91090.1 | SAMN05443550_10268 | SAMN05443550_101408 | Putative porin. | Hypothetical protein. | 0.756 |
SEA12825.1 | SEA01697.1 | SAMN05443550_10268 | SAMN05443550_101696 | Putative porin. | TonB dependent receptor. | 0.745 |
SEA12825.1 | SEA17290.1 | SAMN05443550_10268 | SAMN05443550_102193 | Putative porin. | Hypothetical protein. | 0.573 |
SEA12825.1 | SEA19751.1 | SAMN05443550_10268 | SAMN05443550_102267 | Putative porin. | Protein of unknown function. | 0.764 |
SEA12825.1 | SEA26422.1 | SAMN05443550_10268 | SAMN05443550_102470 | Putative porin. | Hypothetical protein. | 0.623 |
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