Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ80107.1 | SEA98408.1 | SAMN05443550_10126 | SAMN05443550_1084 | Dual specificity MAP kinase phosphatase. | Hypothetical protein. | 0.894 |
SDZ80107.1 | SEB02462.1 | SAMN05443550_10126 | SAMN05443550_108227 | Dual specificity MAP kinase phosphatase. | Integrative and conjugative element protein, VC0181 family. | 0.473 |
SDZ80107.1 | SEB16835.1 | SAMN05443550_10126 | SAMN05443550_113104 | Dual specificity MAP kinase phosphatase. | WD-40 repeat-containing protein. | 0.969 |
SDZ92779.1 | SEA92294.1 | SAMN05443550_101458 | SAMN05443550_10711 | Putative mRNA 3-end processing factor. | Superfamily II DNA or RNA helicase, SNF2 family. | 0.548 |
SDZ92779.1 | SEB16835.1 | SAMN05443550_101458 | SAMN05443550_113104 | Putative mRNA 3-end processing factor. | WD-40 repeat-containing protein. | 0.952 |
SDZ92779.1 | gpmI | SAMN05443550_101458 | SAMN05443550_101683 | Putative mRNA 3-end processing factor. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.887 |
SDZ92779.1 | rpoA | SAMN05443550_101458 | SAMN05443550_10286 | Putative mRNA 3-end processing factor. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.783 |
SDZ92779.1 | rpoB | SAMN05443550_101458 | SAMN05443550_111104 | Putative mRNA 3-end processing factor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.831 |
SEA92294.1 | SDZ92779.1 | SAMN05443550_10711 | SAMN05443550_101458 | Superfamily II DNA or RNA helicase, SNF2 family. | Putative mRNA 3-end processing factor. | 0.548 |
SEA92294.1 | SEA98408.1 | SAMN05443550_10711 | SAMN05443550_1084 | Superfamily II DNA or RNA helicase, SNF2 family. | Hypothetical protein. | 0.905 |
SEA92294.1 | SEB02462.1 | SAMN05443550_10711 | SAMN05443550_108227 | Superfamily II DNA or RNA helicase, SNF2 family. | Integrative and conjugative element protein, VC0181 family. | 0.973 |
SEA92294.1 | SEB16835.1 | SAMN05443550_10711 | SAMN05443550_113104 | Superfamily II DNA or RNA helicase, SNF2 family. | WD-40 repeat-containing protein. | 0.985 |
SEA92294.1 | SEB20059.1 | SAMN05443550_10711 | SAMN05443550_11636 | Superfamily II DNA or RNA helicase, SNF2 family. | Acetoin utilization deacetylase AcuC. | 0.906 |
SEA92294.1 | gpmI | SAMN05443550_10711 | SAMN05443550_101683 | Superfamily II DNA or RNA helicase, SNF2 family. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.538 |
SEA92294.1 | rpoA | SAMN05443550_10711 | SAMN05443550_10286 | Superfamily II DNA or RNA helicase, SNF2 family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
SEA92294.1 | rpoB | SAMN05443550_10711 | SAMN05443550_111104 | Superfamily II DNA or RNA helicase, SNF2 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.991 |
SEA98408.1 | SDZ80107.1 | SAMN05443550_1084 | SAMN05443550_10126 | Hypothetical protein. | Dual specificity MAP kinase phosphatase. | 0.894 |
SEA98408.1 | SEA92294.1 | SAMN05443550_1084 | SAMN05443550_10711 | Hypothetical protein. | Superfamily II DNA or RNA helicase, SNF2 family. | 0.905 |
SEA98408.1 | SEB02462.1 | SAMN05443550_1084 | SAMN05443550_108227 | Hypothetical protein. | Integrative and conjugative element protein, VC0181 family. | 0.991 |
SEA98408.1 | SEB16835.1 | SAMN05443550_1084 | SAMN05443550_113104 | Hypothetical protein. | WD-40 repeat-containing protein. | 0.988 |
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