Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ93169.1 | SEA14966.1 | SAMN05443550_101469 | SAMN05443550_102126 | Hypothetical protein. | Signal transduction histidine kinase. | 0.999 |
SDZ93169.1 | SEA62576.1 | SAMN05443550_101469 | SAMN05443550_104140 | Hypothetical protein. | Two-component system, OmpR family, sensor histidine kinase KdpD. | 0.850 |
SDZ93169.1 | SEA66190.1 | SAMN05443550_101469 | SAMN05443550_104276 | Hypothetical protein. | Sensor domain CHASE3-containing protein. | 0.999 |
SDZ93169.1 | SEA66584.1 | SAMN05443550_101469 | SAMN05443550_104289 | Hypothetical protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.999 |
SDZ93169.1 | SEA66610.1 | SAMN05443550_101469 | SAMN05443550_104290 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.999 |
SDZ93169.1 | SEA75313.1 | SAMN05443550_101469 | SAMN05443550_10571 | Hypothetical protein. | Response regulator receiver domain-containing protein. | 0.999 |
SDZ93169.1 | SEA95055.1 | SAMN05443550_101469 | SAMN05443550_107135 | Hypothetical protein. | Signal transduction histidine kinase. | 0.999 |
SDZ93169.1 | SEA95081.1 | SAMN05443550_101469 | SAMN05443550_107136 | Hypothetical protein. | Response regulator receiver domain-containing protein. | 0.821 |
SDZ93169.1 | SEB18222.1 | SAMN05443550_101469 | SAMN05443550_11478 | Hypothetical protein. | Signal transduction histidine kinase. | 0.876 |
SDZ93169.1 | SEB19149.1 | SAMN05443550_101469 | SAMN05443550_11535 | Hypothetical protein. | Twitching motility two-component system response regulator PilG/two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | 0.999 |
SEA14966.1 | SDZ93169.1 | SAMN05443550_102126 | SAMN05443550_101469 | Signal transduction histidine kinase. | Hypothetical protein. | 0.999 |
SEA14966.1 | SEA62576.1 | SAMN05443550_102126 | SAMN05443550_104140 | Signal transduction histidine kinase. | Two-component system, OmpR family, sensor histidine kinase KdpD. | 0.887 |
SEA14966.1 | SEA66190.1 | SAMN05443550_102126 | SAMN05443550_104276 | Signal transduction histidine kinase. | Sensor domain CHASE3-containing protein. | 0.999 |
SEA14966.1 | SEA66584.1 | SAMN05443550_102126 | SAMN05443550_104289 | Signal transduction histidine kinase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.998 |
SEA14966.1 | SEA66610.1 | SAMN05443550_102126 | SAMN05443550_104290 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SEA14966.1 | SEA75313.1 | SAMN05443550_102126 | SAMN05443550_10571 | Signal transduction histidine kinase. | Response regulator receiver domain-containing protein. | 0.999 |
SEA14966.1 | SEA95055.1 | SAMN05443550_102126 | SAMN05443550_107135 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SEA14966.1 | SEA95081.1 | SAMN05443550_102126 | SAMN05443550_107136 | Signal transduction histidine kinase. | Response regulator receiver domain-containing protein. | 0.834 |
SEA14966.1 | SEB18222.1 | SAMN05443550_102126 | SAMN05443550_11478 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.932 |
SEA14966.1 | SEB19149.1 | SAMN05443550_102126 | SAMN05443550_11535 | Signal transduction histidine kinase. | Twitching motility two-component system response regulator PilG/two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | 0.999 |
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