STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB20734.1Hypothetical protein. (358 aa)    
Predicted Functional Partners:
SEB20739.1
Hypothetical protein.
       0.768
SEB20728.1
Hypothetical protein.
       0.675
SEB20724.1
Hypothetical protein.
       0.572
SEB20709.1
Hypothetical protein.
       0.540
SEB20714.1
Hypothetical protein.
       0.540
SEB20720.1
Hypothetical protein.
       0.540
SEB20743.1
Hypothetical protein.
       0.522
SEB20748.1
SOS response associated peptidase (SRAP); Belongs to the SOS response-associated peptidase family.
       0.522
SDZ97241.1
Hypothetical protein.
  
     0.514
SEB20704.1
Tellurium resistance protein TerD.
       0.475
Your Current Organism:
Pedobacter hartonius
NCBI taxonomy Id: 425514
Other names: CIP 109468, DSM 19033, P. hartonius, Pedobacter hartonius Muurholm et al. 2007, WB 3.3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.