Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB19556.1 | SEB21711.1 | SAMN05443550_11598 | SAMN05443550_12118 | Glutamate synthase (NADPH/NADH) large chain. | IAA-amino acid hydrolase. | 0.665 |
SEB19556.1 | dapF | SAMN05443550_11598 | SAMN05443550_102365 | Glutamate synthase (NADPH/NADH) large chain. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.976 |
SEB21706.1 | SEB21711.1 | SAMN05443550_12117 | SAMN05443550_12118 | Subtilase family protein. | IAA-amino acid hydrolase. | 0.459 |
SEB21706.1 | SEB21718.1 | SAMN05443550_12117 | SAMN05443550_12119 | Subtilase family protein. | Aspartyl protease. | 0.407 |
SEB21711.1 | SEB19556.1 | SAMN05443550_12118 | SAMN05443550_11598 | IAA-amino acid hydrolase. | Glutamate synthase (NADPH/NADH) large chain. | 0.665 |
SEB21711.1 | SEB21706.1 | SAMN05443550_12118 | SAMN05443550_12117 | IAA-amino acid hydrolase. | Subtilase family protein. | 0.459 |
SEB21711.1 | SEB21718.1 | SAMN05443550_12118 | SAMN05443550_12119 | IAA-amino acid hydrolase. | Aspartyl protease. | 0.598 |
SEB21711.1 | SEB21723.1 | SAMN05443550_12118 | SAMN05443550_12120 | IAA-amino acid hydrolase. | Glycosyl transferase family 2. | 0.421 |
SEB21711.1 | dapF | SAMN05443550_12118 | SAMN05443550_102365 | IAA-amino acid hydrolase. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.486 |
SEB21718.1 | SEB21706.1 | SAMN05443550_12119 | SAMN05443550_12117 | Aspartyl protease. | Subtilase family protein. | 0.407 |
SEB21718.1 | SEB21711.1 | SAMN05443550_12119 | SAMN05443550_12118 | Aspartyl protease. | IAA-amino acid hydrolase. | 0.598 |
SEB21718.1 | SEB21723.1 | SAMN05443550_12119 | SAMN05443550_12120 | Aspartyl protease. | Glycosyl transferase family 2. | 0.529 |
SEB21723.1 | SEB21711.1 | SAMN05443550_12120 | SAMN05443550_12118 | Glycosyl transferase family 2. | IAA-amino acid hydrolase. | 0.421 |
SEB21723.1 | SEB21718.1 | SAMN05443550_12120 | SAMN05443550_12119 | Glycosyl transferase family 2. | Aspartyl protease. | 0.529 |
dapF | SEB19556.1 | SAMN05443550_102365 | SAMN05443550_11598 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | Glutamate synthase (NADPH/NADH) large chain. | 0.976 |
dapF | SEB21711.1 | SAMN05443550_102365 | SAMN05443550_12118 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | IAA-amino acid hydrolase. | 0.486 |