STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPH5Diphthamide biosynthesis 5. (285 aa)    
Predicted Functional Partners:
EEF2
Eukaryotic translation elongation factor 2.
    
 0.995
DPH2
Diphthamide biosynthesis 2.
   
 0.940
DPH1
Diphthamide biosynthesis 1.
   
 0.939
DPH6
Diphthamine biosynthesis 6.
  
 
 0.929
EFL1
Elongation factor like GTPase 1.
    
 0.819
GFM1
G elongation factor mitochondrial 1.
    
 0.819
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
 0.819
GMPS
Guanine monophosphate synthase.
   
  
 0.697
RTCA
RNA 3'-terminal phosphate cyclase.
   
  
 0.687
NIP7
Nucleolar pre-rRNA processing protein NIP7.
  
    0.660
Your Current Organism:
Calidris pygmaea
NCBI taxonomy Id: 425635
Other names: C. pygmaea, Calidris pygmea, Calidris pygmeus, Eurynorhynchus pygmaeus, Eurynorhynchus pygmeum, Eurynorhynchus pygmeus, Platalea pygmea, Spoon-billed sandpiper
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.