STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPGP00000008564annotation not available (224 aa)    
Predicted Functional Partners:
ENSCPGP00000004242
annotation not available
    
  0.639
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.639
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
  0.631
TEK
TEK receptor tyrosine kinase.
    
 0.600
TIE1
Tyrosine kinase with immunoglobulin like and EGF like domains 1.
    
 0.600
MCRS1
Microspherule protein 1.
    
  0.580
ENSCPGP00000007920
annotation not available
     
  0.507
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.496
ENSCPGP00000001032
annotation not available
    
  0.477
ENSCPGP00000004525
annotation not available
    
  0.477
Your Current Organism:
Calidris pygmaea
NCBI taxonomy Id: 425635
Other names: C. pygmaea, Calidris pygmea, Calidris pygmeus, Eurynorhynchus pygmaeus, Eurynorhynchus pygmeum, Eurynorhynchus pygmeus, Platalea pygmea, Spoon-billed sandpiper
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.