STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPGP00000009401annotation not available (140 aa)    
Predicted Functional Partners:
ADGRL2
Adhesion G protein-coupled receptor L2.
    
  0.821
ADGRL3
Adhesion G protein-coupled receptor L3.
    
  0.821
NTNG1
Netrin G1.
    
 0.766
AK9
Adenylate kinase 9.
   
  0.708
CASK
Calcium/calmodulin dependent serine protein kinase.
    
  0.632
ENSCPGP00000004242
annotation not available
   
 0.614
MET
MET proto-oncogene, receptor tyrosine kinase.
   
 0.614
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
    
 0.571
ENSCPGP00000024060
annotation not available
    
 0.566
PHF5A
PHD finger protein 5A.
    
  0.557
Your Current Organism:
Calidris pygmaea
NCBI taxonomy Id: 425635
Other names: C. pygmaea, Calidris pygmea, Calidris pygmeus, Eurynorhynchus pygmaeus, Eurynorhynchus pygmeum, Eurynorhynchus pygmeus, Platalea pygmea, Spoon-billed sandpiper
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.