STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC79Unc-79 homolog, NALCN channel complex subunit. (2636 aa)    
Predicted Functional Partners:
NALCN
Sodium leak channel, non-selective.
   
 0.999
ENSCPGP00000002617
annotation not available
   
 0.997
CATSPER3
Cation channel sperm associated 3.
   
 0.997
ENSCPGP00000009143
annotation not available
   
 0.997
ENSCPGP00000009514
annotation not available
   
 0.997
ENSCPGP00000009853
annotation not available
   
 0.997
ENSCPGP00000013349
annotation not available
   
 0.997
CACNA1S
Calcium voltage-gated channel subunit alpha1 S.
   
 0.997
ENSCPGP00000014668
annotation not available
   
 0.997
ENSCPGP00000015834
annotation not available
   
 0.997
Your Current Organism:
Calidris pygmaea
NCBI taxonomy Id: 425635
Other names: C. pygmaea, Calidris pygmea, Calidris pygmeus, Eurynorhynchus pygmaeus, Eurynorhynchus pygmeum, Eurynorhynchus pygmeus, Platalea pygmea, Spoon-billed sandpiper
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.