STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL41Mitochondrial ribosomal protein L41. (170 aa)    
Predicted Functional Partners:
ENSCPGP00000022034
annotation not available
   
 
 0.998
MRPL17
Mitochondrial ribosomal protein L17.
   
 
 0.998
MRPS12
Mitochondrial ribosomal protein S12.
   
 
 0.998
MRPL36
Mitochondrial ribosomal protein L36.
   
 
 0.997
MRPL13
Mitochondrial ribosomal protein L13.
   
 
 0.997
MRPL16
Mitochondrial ribosomal protein L16.
   
 0.995
MRPS16
Mitochondrial ribosomal protein S16.
   
 
 0.995
DAP3
Death associated protein 3.
    
 
 0.995
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.995
MRPL3
Mitochondrial ribosomal protein L3.
   
  0.995
Your Current Organism:
Calidris pygmaea
NCBI taxonomy Id: 425635
Other names: C. pygmaea, Calidris pygmea, Calidris pygmeus, Eurynorhynchus pygmaeus, Eurynorhynchus pygmeum, Eurynorhynchus pygmeus, Platalea pygmea, Spoon-billed sandpiper
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.