STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP66_00540Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)    
Predicted Functional Partners:
FP66_06300
PA-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.744
FP66_12225
Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.686
FP66_10085
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.672
fadH
2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.624
FP66_05555
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.619
FP66_07060
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.619
FP66_10285
CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.600
FP66_05060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.598
FP66_13265
Chloride channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.598
FP66_15010
Lipid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.594
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.