Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP66_00545Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)    
Predicted Functional Partners:
FP66_00550
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
FP66_02765
3-deoxy-D-manno-octulosonic acid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.584
FP66_00555
Tartrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.547
FP66_15880
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.504
FP66_15990
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.484
FP66_06810
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.460
FP66_09805
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.460
FP66_15600
Hydroxyacylglutathione hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.460
uvrC
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.454
FP66_10010
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.441
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.