Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP66_01035Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)    
Predicted Functional Partners:
FP66_02425
Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.972
FP66_01040
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.951
FP66_14225
Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.949
FP66_14230
Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.863
FP66_01045
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.858
pstB
ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.833
FP66_14235
ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.833
FP66_05450
Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.798
FP66_11800
Sugar ABC transporter substrate-binding protein; With AraGH is involved in the transport of arabinose into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.607
araG
L-arabinose transporter ATP-binding protein; Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.591
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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