Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
FP66_01435Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)    
Predicted Functional Partners:
FP66_01440
NAD-dependent protein deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.725
FP66_07490
Cell division protein ZapB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
FP66_01895
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.461
FP66_14415
Biotin synthase; Catalyzes the formation of biotin from dethiobiotin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.447
FP66_04130
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.433
FP66_14420
8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.433
FP66_01445
Pseudouridylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.432
FP66_01450
Sulfur acceptor protein CsdL; Accepts sulfur from CsdA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.432
FP66_16190
H-NS histone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.423
FP66_02870
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.416
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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