Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP66_01740Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)    
Predicted Functional Partners:
FP66_01745
tRNA synthetase RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.953
FP66_11150
Inosine-5-monophosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.889
FP66_12740
Stationary phase survival protein SurE; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.881
guaA
GMP synthase; Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.875
FP66_01575
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.867
deoD
Purine nucleoside phosphorylase; Catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.867
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.867
FP66_02665
Nucleoside-triphosphate diphosphatase; HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.867
FP66_08055
Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.867
FP66_10250
Laccase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.867
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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