Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP66_01865SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)    
Predicted Functional Partners:
FP66_01870
16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.878
FP66_01915
tRNA methyltransferase; Catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.822
FP66_04140
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.757
FP66_07745
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.745
FP66_02820
2-octaprenyl-6-methoxyphenyl hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.722
FP66_12410
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.719
FP66_14865
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.713
FP66_02825
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.675
FP66_15595
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.643
FP66_01920
tRNA (cmo5U34)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.626
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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