Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP66_01975mopB; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)    
Predicted Functional Partners:
fliP
FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.998
FP66_01985
Flagellar biosynthetic protein FliQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.998
FP66_01990
Flagellar biosynthesis protein FliR; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
fliM
Flagellar motor switch protein FliM; With FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
FP66_14270
Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
FP66_14280
Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
FP66_01960
Flagellar basal body protein FliL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
FP66_01970
Flagellar motor switch protein FliN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.995
FP66_08405
Flagellar biosynthesis protein FlhB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.993
FP66_14275
ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.992
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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