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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP66_02490UDP pyrophosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)    
Predicted Functional Partners:
FP66_07300
Farnesyl-diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.924
FP66_00230
phospho-N-acetylmuramoyl-pentapeptide- transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.911
FP66_05475
PA-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.901
glmU
Forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.869
FP66_02485
Thiamine biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.828
FP66_02475
Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.767
FP66_06300
PA-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.724
FP66_02495
Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.662
FP66_09410
Ribosomal RNA small subunit methyltransferase J; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.618
FP66_02470
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.536
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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