Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP66_02565Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)    
Predicted Functional Partners:
FP66_02560
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
FP66_02570
16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.826
gidA
GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.741
FP66_03935
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.683
FP66_08925
Alginate biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.636
FP66_10510
Alginate biosynthesis protein Alg8; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.636
FP66_02700
Chromosomal replication initiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.602
FP66_03125
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.557
FP66_06400
biotin--acetyl-CoA-carboxylase ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.512
FP66_06055
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.502
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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