Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FP66_03055Succinate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (493 aa)    
Predicted Functional Partners:
FP66_03050
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.955
FP66_15310
Diaminobutyrate--2-oxoglutarate aminotransferase; Catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.901
FP66_05905
Aromatic amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.896
FP66_05985
Aspartate-semialdehyde dehydrogenase; Catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.882
FP66_07010
Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.882
FP66_07560
Homoserine dehydrogenase; Catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.873
FP66_10795
Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.873
FP66_04680
L-aspartate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.867
FP66_10535
Adenylosuccinate synthetase; Catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.867
FP66_12290
Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.867
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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