Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP66_03085Deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)    
Predicted Functional Partners:
FP66_03090
X-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.994
FP66_03050
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.918
FP66_15310
Diaminobutyrate--2-oxoglutarate aminotransferase; Catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.881
FP66_15305
L-2,4-diaminobutyric acid acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.867
FP66_03080
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.865
FP66_11475
Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.825
FP66_03075
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.670
gltB
Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.643
FP66_09625
Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.614
FP66_03285
Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.595
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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