STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP66_03280Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)    
Predicted Functional Partners:
FP66_10700
Agglutination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.862
FP66_03135
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.786
FP66_04185
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.675
FP66_07720
LPS biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.593
FP66_01835
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.567
FP66_04970
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.567
FP66_03285
Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
FP66_02675
Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.528
FP66_05385
Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.528
FP66_15200
Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.528
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.