STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP66_03330Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)    
Predicted Functional Partners:
FP66_03325
AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.883
FP66_03320
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.858
FP66_03300
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.826
FP66_03305
Twin-arginine translocation pathway signal; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.818
FP66_03310
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.817
FP66_03315
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.743
FP66_14055
Ribonucleotide-diphosphate reductase subunit alpha; Catalyzes the rate-limiting step in dNTP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.521
gltB
Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.512
FP66_06690
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.460
FP66_11795
Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.453
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.