FP66_03355 protein (Halomonas salina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

FP66_03355

ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)

Predicted Functional Partners:

FP66_03350

0.642

gltB

0.577

FP66_15065

0.544

FP66_10355

0.526

fadH

0.514

Your Current Organism:

Halomonas salina

NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FP66_03350	FP66_03355	FP66_03350	FP66_03355	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
FP66_03355	FP66_03350	FP66_03355	FP66_03350	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
FP66_03355	FP66_10355	FP66_03355	FP66_10355	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.526
FP66_03355	FP66_15065	FP66_03355	FP66_15065	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
FP66_03355	fadH	FP66_03355	FP66_09240	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514
FP66_03355	gltB	FP66_03355	FP66_07065	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.577
FP66_10355	FP66_03355	FP66_10355	FP66_03355	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.526
FP66_10355	FP66_15065	FP66_10355	FP66_15065	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
FP66_10355	fadH	FP66_10355	FP66_09240	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
FP66_10355	gltB	FP66_10355	FP66_07065	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.945
FP66_15065	FP66_03355	FP66_15065	FP66_03355	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
FP66_15065	FP66_10355	FP66_15065	FP66_10355	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
FP66_15065	fadH	FP66_15065	FP66_09240	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
FP66_15065	gltB	FP66_15065	FP66_07065	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
fadH	FP66_03355	FP66_09240	FP66_03355	2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514
fadH	FP66_10355	FP66_09240	FP66_10355	2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
fadH	FP66_15065	FP66_09240	FP66_15065	2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
fadH	gltB	FP66_09240	FP66_07065	2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
gltB	FP66_03355	FP66_07065	FP66_03355	Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.	ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.577
gltB	FP66_10355	FP66_07065	FP66_10355	Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.945

page 1 of 2

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About