STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP66_03490Phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)    
Predicted Functional Partners:
FP66_14095
Thiamine-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
FP66_09185
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
FP66_14100
Hydroxyethylthiazole kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
FP66_09190
Thiamine biosynthesis protein ThiC; Catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.982
FP66_02615
Phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.911
FP66_13850
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.885
FP66_03410
Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.866
FP66_03415
Thiazole synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.789
FP66_03495
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.766
FP66_03485
Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.751
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.