STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP66_04400DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (534 aa)    
Predicted Functional Partners:
FP66_04385
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
FP66_04390
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
FP66_04395
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
FP66_04405
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
FP66_08755
Catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.654
FP66_15090
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.578
FP66_09930
Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.574
FP66_08680
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.547
FP66_08745
Adenosylhomocysteinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.531
FP66_06735
ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.511
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.