Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
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[Homology]
Score
FP66_04400DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (534 aa)    
Predicted Functional Partners:
FP66_08755
Catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.816
FP66_04385
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.787
FP66_04390
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
FP66_04395
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
FP66_04405
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
FP66_07740
S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.751
FP66_15850
5'-methylthioadenosine nucleosidase; Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.751
FP66_13610
8-oxoguanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.587
FP66_08745
Adenosylhomocysteinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.586
FP66_06655
dTDP-4-dehydrorhamnose reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.580
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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