Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP66_04700Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (101 aa)    
Predicted Functional Partners:
FP66_04705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.906
FP66_10705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
FP66_02810
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
FP66_14680
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
FP66_14440
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
FP66_06655
dTDP-4-dehydrorhamnose reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
FP66_06020
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
ihfB
This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.742
FP66_00065
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.741
FP66_07515
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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