Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP66_05945acetyl-CoA carboxylase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)    
Predicted Functional Partners:
FP66_05950
Folylpolyglutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.908
FP66_05955
acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.851
FP66_05940
Colicin V production protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.841
FP66_05935
Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.811
FP66_05930
Catalyzes the conversion of O-succinylhomoserine into homocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.742
FP66_05960
Tryptophan synthase alpha chain; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.643
FP66_05965
Tryptophan synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.598
FP66_10600
Oligoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.565
FP66_05970
N-(5'-phosphoribosyl)anthranilate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
FP66_00280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.522
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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