Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP66_06925Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology. (663 aa)    
Predicted Functional Partners:
FP66_06930
Cytochrome C biogenesis protein CcmC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
FP66_06945
Heme transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
FP66_06950
ATP-binding protein; required for proper cytochrome c maturation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
FP66_06935
Heme exporter protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.989
FP66_06920
Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.976
FP66_06915
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.966
FP66_06940
Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.960
FP66_06910
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.923
FP66_11530
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.741
FP66_06740
Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.707
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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