Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP66_06960Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)    
Predicted Functional Partners:
FP66_06955
Repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.841
FP66_06945
Heme transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.695
FP66_06950
ATP-binding protein; required for proper cytochrome c maturation; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.695
FP66_06930
Cytochrome C biogenesis protein CcmC; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.687
FP66_06935
Heme exporter protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.687
FP66_06940
Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.687
FP66_06910
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.683
FP66_06915
Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.683
FP66_06925
Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.683
FP66_06920
Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.676
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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