Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP66_07005Carbon storage regulator; Affects carbohydrate metabolism; has regulatory role in many processes; Derived by automated computational analysis using gene prediction method: Protein Homology. (66 aa)    
Predicted Functional Partners:
FP66_10560
RNA-binding protein Hfq; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.893
FP66_05420
Integration host factor subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.829
FP66_08285
Flagellin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.780
FP66_07010
Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.754
FP66_13510
Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.747
FP66_08280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.659
FP66_14290
Flagellar M-ring protein FliF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.646
flgC
With FlgF and B makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.632
ihfB
This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.632
FP66_03230
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.616
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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