Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP66_07175Preprotein translocase subunit TatA; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)    
Predicted Functional Partners:
FP66_07185
With TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
guaA
GMP synthase; Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.937
FP66_07170
phosphoribosyl-ATP pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.920
FP66_07165
Ubiquinone biosynthesis protein UbiB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.764
ubiE
Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.740
FP66_07160
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.734
FP66_07150
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.718
FP66_12405
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.710
secD
Preprotein translocase subunit SecD; Part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.667
FP66_00175
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.652
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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