Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
FP66_072253-octaprenyl-4-hydroxybenzoate carboxy-lyase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)    
Predicted Functional Partners:
FP66_06310
Aromatic acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
ubiA
Catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.982
FP66_07220
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.919
FP66_07215
Dihydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.841
rho
Transcription termination factor Rho; An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.660
FP66_12275
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.649
FP66_02825
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.646
FP66_14865
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.646
ubiE
Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  
 0.641
FP66_12430
3-methylitaconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.565
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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