Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
FP66_08055Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)    
Predicted Functional Partners:
relA
(p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.984
FP66_08035
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.966
FP66_01820
Thymidylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.921
FP66_11210
Septum formation protein Maf; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.896
FP66_02345
(p)ppGpp synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.891
pyrG
CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.890
FP66_09420
Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.890
FP66_16165
dephospho-CoA kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.890
FP66_11885
ADP-ribose pyrophosphatase; NadM-Nudix subfamily; involved in creation of nicotanimide adenine dinucleotide NAD from either biosynthetic or salvage pathways; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.887
FP66_01900
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.886
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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