Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP66_08080Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)    
Predicted Functional Partners:
FP66_08085
Zinc chelation protein SecC; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.743
FP66_08075
DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.713
FP66_08070
2-dehydropantoate 2-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.697
FP66_07745
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.652
FP66_14865
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.502
FP66_15220
3-demethylubiquinone-9 3-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.501
FP66_02820
2-octaprenyl-6-methoxyphenyl hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.497
FP66_13440
Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.465
fusA
Elongation factor G; EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.464
FP66_01865
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.427
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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